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1

Predicting protein-protein interactions on a proteome scale by matching evolutionary and structural similarities at interfaces using PRISM

Tuncbag, Nurcan, Gursoy, Attila, Nussinov, Ruth, Keskin, Ozlem

Journal:

Nature Protocols

Year:

2011

Language:

english

File:

PDF, 749 KB

english, 2011

2

Predicting Protein–Protein Interactions from the Molecular to the Proteome Level

Keskin, Ozlem, Tuncbag, Nurcan, Gursoy, Attila

Journal:

Chemical Reviews

Year:

2016

Language:

english

File:

PDF, 10.57 MB

english, 2016

3

Towards inferring time dimensionality in protein–protein interaction networks by integrating structures: the p53 example

Tuncbag, Nurcan, Kar, Gozde, Gursoy, Attila, Keskin, Ozlem, Nussinov, Ruth

Journal:

Molecular BioSystems

Year:

2009

Language:

english

File:

PDF, 2.78 MB

english, 2009

4

The phenotype of persons having mosaicism for trisomy 21/Down syndrome reflects the percentage of trisomic cells present in different tissues

Paulie Papavassiliou, Timothy P. York, Nurcan Gursoy, Gloria Hill, Lauren Vanner Nicely, Usha Sundaram, Allison McClain, Steven H. Aggen, Lindon Eaves, Brien Riley, Colleen Jackson-Cook

Journal:

American Journal of Medical Genetics Part A

Year:

2009

Language:

english

File:

PDF, 408 KB

english, 2009

5

Analysis and network representation of hotspots in protein interfaces using minimum cut trees

Nurcan Tuncbag, F. Sibel Salman, Ozlem Keskin, Attila Gursoy

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2010

Language:

english

File:

PDF, 1.88 MB

english, 2010

6

The potential impact of recent developments in three-dimensional quantitative interaction proteomics on structural biology

Tuncbag, Nurcan, Gursoy, Attila, Keskin, Ozlem, Nussinov, Ruth

Journal:

Expert Review of Proteomics

Year:

2016

Language:

english

File:

PDF, 496 KB

english, 2016

7

Fast and accurate modeling of protein–protein interactions by combining template-interface-based docking with flexible refinement

Nurcan Tuncbag, Ozlem Keskin, Ruth Nussinov, Attila Gursoy

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2012

Language:

english

File:

PDF, 1.27 MB

english, 2012

8

Prediction of Protein-Protein Interactions at Genome Scale

Tuncbag, Nurcan, Gursoy, Attila, Nussinov, Ruth, Keskin, Ozlem

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 37 KB

english, 2011

9

Architectures and Functional Coverage of Protein–Protein Interfaces

Nurcan Tuncbag, Attila Gursoy, Emre Guney, Ruth Nussinov, Ozlem Keskin

Journal:

Journal of Molecular Biology

Year:

2008

Language:

english

File:

PDF, 3.32 MB

english, 2008

10

High mercury seafood consumption associated with fatigue at specialty medical clinics on Long Island, NY

Kothari, Shivam, Kruse, Danielle, Karimi, Roxanne, Silbernagel, Susan, Gursoy, Nurcan, Jaber, Raja, Roppelt, Heidi, Awan, Rina, Gold, Avram, Meliker, Jaymie R.

Journal:

Preventive Medicine Reports

Year:

2015

Language:

english

File:

PDF, 277 KB

english, 2015

11

Large Scale Prediction of Computational Hot Spots in Protein Interfaces

Tuncbag, Nurcan, Keskin, Ozlem, Nussinov, Ruth, Gursoy, Attila

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 49 KB

english, 2009

12

Prediction of protein–protein interactions: unifying evolution and structure at protein interfaces

Tuncbag, Nurcan, Gursoy, Attila, Keskin, Ozlem

Journal:

Physical Biology

Year:

2011

Language:

english

File:

PDF, 1.20 MB

english, 2011

13

Characterization and Prediction of Protein Interfaces to Infer Protein-Protein Interaction Networks

Keskin, Ozlem, Tuncbag, Nurcan, Gursoy, Attila

Journal:

Current Pharmaceutical Biotechnology

Year:

2008

Language:

english

File:

PDF, 297 KB

english, 2008

14

3D spatial organization and network-guided comparison of mutation profiles in Glioblastoma reveals similarities across patients

Dincer, Cansu, Kaya, Tugba, Keskin, Ozlem, Gursoy, Attila, Tuncbag, Nurcan, Panchenko, Anna R.

Journal:

PLoS Computational Biology

Year:

2019

Language:

english

File:

PDF, 10.27 MB

english, 2019

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